Journal of Proteomics & Bioinformatics
Open Access
ISSN: 0974-276X
ISSN: 0974-276X
Glocker MO
Proteome Center Rostock, Institute of Immunology, University Rostock Medical Center and Natural Science Faculty,
Germany
Research Article
In silico Epitope Mapping of Glucose-6-Phosphate Isomerase: A Rheumatoid Arthritis Autoantigen
Author(s): Opuni KFM, Solomon S, Metzen F, Frommholz D, Koy C, Röwer C, Glocker MO, Illges H and Anderson PCOpuni KFM, Solomon S, Metzen F, Frommholz D, Koy C, Röwer C, Glocker MO, Illges H and Anderson PC
Rheumatoid arthritis-like symptoms can be initiated experimentally in naive K/BxN mice by simultaneously administering the two monoclonal antibodies 11H3 and 46H9. Both antibodies specifically recognize Glucose- 6-Phosphate Isomerase (GPI), a known auto antigen in RA patients. Amino acid sequences of the Fv parts of the antibodies were determined by translating the respective hybridoma DNA sequences and served for threedimensional structure modeling of the paratope regions. In silico docking of both Fv antibody structure models to the X-ray structures of the homodimeric murine GPI as well as to the homodimeric human GPI predicted the murine epitope of the 11H3 antibodies to comprise partial amino acid sequences QRVRSGDWKGYTGKS (aa134-148) and AAKDPSAVAK (aa232-241), generating an assembled (conformational) epitope. The 11H3 epitope on human GPI encompasses the matching partial amino a.. View More»
DOI:
10.4172/jpb.1000425