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Synthesis and Antimicrobial Evaluation of Polyfunctionally Hetero
Organic Chemistry: Current Research

Organic Chemistry: Current Research
Open Access

ISSN: 2161-0401

+44 1478 350008

Research Article - (2016) Volume 5, Issue 2

Synthesis and Antimicrobial Evaluation of Polyfunctionally Heterocyclic Compounds Bearing Quinoline Moiety

Kamal M El-Gamal*
Organic Chemistry Department, Al-Azhar University, Naser City, Cairo, 11884, Egypt
*Corresponding Author: Kamal M El-Gamal, Organic Chemistry Department, Al-Azhar University, Naser City, Cairo, 11884, Egypt, Tel: +20235333442 Email:

Abstract

2-Aminoquinoline-3-carbonitrile 2 was reacted with ethylcyanoacetate to give 3. The latter was used to synthesize different heterocyclic derivatives comprising pyridine, coumarin, pyrimidine, thiophene, and thiazole rings. The synthetic methods depended on regioselective attack and/or cyclization by the cyanoacetamido moiety as a key compound on various chemical reagents. The competition of the reaction pathways including dipolar cyclization, dinucleophilicbielectrophilic attack, and β-attack that leads to the diversity of the synthesized products. All these newly synthesized compounds were characterized by elemental analysis and spectral data, and screened for their antimicrobial activity.

Keywords: 2-aminoquinoline-3-carbonitrile; Pyridine; Coumarin; Pyrimidine; Thiophene; Thiazole; Antimicrobial activity

Introduction

Quinoline nucleus is often used for the design of many synthetic compounds with diverse pharmacological properties [1]. Quinoline and its derivatives are receiving important due to their wide range of biological activities as antitumor [2], antibacterial [3], anticonvulsant [4], analgesic [5], antiallergic [6], antiamoebic [7]. In addition it also exhibit good antimalarial [8], antihistaminic [9], antitubercular [10], and antineurodegerative activity [11]. In our work, the ring anillation of quinoline to amino that was converted into cyanoactamide moiety and the latter was used to synthesize different heterocyclic derivatives comprising thiophene, thiazole, pyridine, pyrimidine, and coumarin rings that exhibit some interesting pharmacological activities [12]. Further, the mechanistic and synthetic pathways depended on cyclization by the cyanoactamide moiety as the key precursor on various chemical reagents. The simplicity of the synthetic procedures mainly involved reactions under mild conditions, and convenience of yield production. The newly synthesized compounds were evaluated for their antimicrobial activity.

Experimental

General

Melting points were measured in capillary tube on a Graffin melting point apparatus and are uncorrected. The IR spectra were recorded on Pye Unicam SP 1000 IR spectrophotometer using KBr discs (λ max in cm-1). 1H NMR spectra were performed on Gemini 300BB (300 MHz), and 300 MHz for 13C NMR) spectrometer, using TMS as internal standard and DMSO-d6 as solvent; the chemical shifts are reported in ppm (δ) and coupling constant (J) values are given in Hertz (Hz). Signal multiplicities are represented by s (singlet), d (doublet), t (triplet), q (quadruplet), and m (multiplet). All of the new compounds were analyzed for C, H and N and agreed with the proposed structures within ± 0.4% of the theoretical values by the automated CHN analyzer. Mass spectra were recorded on Hewlett Packard 5988 spectrometer at the RCMB. The purity of the compounds was checked by thin layer chromatography (TLC) on Merck silica gel 60 F 254 precoated sheets. All analyses were performed at the Micro-analytical Unit of Cairo University, Cairo, Egypt.

Chemistry

2-Aminoquinoline-3-carbonitrile (2): To the well stirred solution of 2-chloroquinoline-3-carbonitrile [13-16] (1) (1.88 g, 0.002 mmol) and tetrabutylammonium bromide (0.202 g, 0.0005 mmol), chlorobenzene (15 mL) and sodium azide (0.39 g, 0.006 mol) in water (5 mL) were added and the reaction mixture was stirred under reflux for 1.5 hrs., at completion of time powdered sodium borohydride (0.302 g, 0.008 mmol) was added to the reaction mixture portion wise cautiously over a period of 30 mint. The same reaction mixture was then refluxed for 2-3 hrs. On completion (TLC) the aqueous phase was separated and extracted with chlorobenzene, and combined organic layer was washed with water and drying using anhydrous sodium sulphate. The solvent was recovered under vacuum, the content was treated with n-hexane and the solid thus formed was filtered, washed with cold methanol, dried and crystalized from methanol: chloroform (7:3 V/V). Our procedure differs from the reported [17-19] one but it modifies the other one [20] to get the compound 2 according to the preferred procedure [21].

Yield 75%, M.p. 228-230°C. IR (KBr, ν, cm-1): 3350, 3296, 2972, 2865, 2215. 1H NMR (300 MHz, [D6] DMSO): δ = 6.54(s, 2H, NH2), 7.19-7.23 (t, 1H, C6-H quinoline), 7.42-7.46 (t, 1H, C7-H quinoline), 7.59-6.62 (d, 1H, C5-H quinoline), 7.76-7.80 (d, 1H, C8-H quinoline), 8.36 (s, 1H, C4-H quinoline). 13C NMR (300 MHz, [D6] DMSO): δ = 84.6 (C-3), 117.7 (CN), 119.4, 122.3, 125.1, 127.2, 132.7 (Ar-C), 153.9 (C-8), 156.8 (C-4), 164.1 (C-2). MS (m/z): 169.18 (23, M+). Analytically calculated for C10H7N3: C, 70.99; H, 4.17; N, 24.84. Found. C, 71.10; H, 4.44; N, 24.91.

2-Cyano-N-(3-cyanoquinolin-2-yl) acetamide (3): To a solution of 2-aminoquinoline-3-carbonitrile (2) (1.69 g, 0.01 mmol) in dimethylformamide (30 mL), ethyl cyanoacetate (1.13 g, 0.01 mmol) was added. The reaction mixture was heated under reflux for 5 h. The solid product formed upon pouring onto ice/water mixture was collected by filtration and crystallized from 1, 4-dioxane.

Yield 71%, M.p. 129-130°C. IR (KBr, ν, cm-1): 3332, 3020, 2837, 2265, 2195 (2CN), 1655. 1H NMR (300 MHz, [D6] DMSO): δ = 4.28 (s, 2H, CH2), 6.83 (s, 1H, NH), 7.19-7.23 (t, 1H, C6-H quinoline), 7.55- 7.58 (t, 1H, C7-H quinoline), 7.62-7.65 (d, 1H, C5-H quinoline), 7.73- 7.77 (d, 1H, C8-H quinoline), 8.27 (s, 1H, C4-H quinoline). MS (m/z): 236.23 (12.15, M+). Analytically calculated for C13H8N4O: C, 66.10; H, 3.41; N, 23.72. Found. C, 65.89; H, 3.57; N, 23.66.

Synthesis of 3-cyanoquinolin-2-yl functionalized 2-pyridone derivatives (4a-d): To a solution of 3 (2.36 g, 0.01 mmol) in 1,4-dioxane (25 mL) and dimethylformamide (5 mL) containing triethylamine (1.00 mL), either malononitrile (0.66 g, 0.01 mmol) or ethyl cyanoacetate (1.13 g, 0.01 mmol), acetyl acetone (1.00 g, 0.01 mmol) or ethyl acetoacetate (1.33 g, 0.01 mmol) was added. The reaction mixture, in each case, was heated under reflux for 5 h, then cooled and neutralized by pouring onto ice/water mixture containing few drops of hydrochloric acid. The solid products formed, in each case, was filtered off and crystallized from 1, 4-dioxane/dimethylformamide mixture (3:2).

2-(4,6-Diamino-3-cyano-2-oxopyridin-1(2H)-yl) quinoline-3- carbonitrile (4a): Yield 77%, M.p. 198-199°C. IR (KBr, ν, cm-1): 3335, 3270 (2NH2), 3075, 2832, 2242, 2198(2CN), 1625. 1H NMR (300 MHz, [D6] DMSO- D2O): δ=2.95, 2.99 (2s, 4H-2NH2, D2O exchangeable), 7.69 (s, 1H, C5-H pyridine), 7.22-7.26 (t, 1H, C6-H quinoline), 7.52- 7.55 (t, 1H, C7-H quinoline), 7.60-7.63 (d, 1H, C5-H quinoline), 7.78- 7.83 (d, 1H, C8-H quinoline), 8.45 (s, 1H, C4-H quinoline). MS (m/z): 302.29 (9.18, M+). Analytically calculated for C16H10N6O: C, 63.57; H, 3.33; N, 27.80. Found. C, 63.31; H, 3.56; N, 27.90.

2-(4-Amino-3-cyano-6-hydroxy-2-oxopyridin-1(2H)-yl) quinoline-3-carbonitrile (4b): Yield 63%, M.p. 235-237°C. IR (KBr, ν, cm-1): 3479 (OH), 3337 (NH2), 3099, 2840, 2229, 2195(2CN), 1658. 1H NMR (300 MHz, [D6] DMSO- D2O): δ=4.24 (s, 2H-NH2 D2O exchangeable), 6.45 (s, 1H, C5-H pyridine), 7.29-7.32 (t, 1H, C6-H quinoline), 7.57-7.60 (t, 1H, C7-H quinoline), 7.64-7.66 (d, 1H, C5H quinoline), 7.80-7.84 (d, 1H, C8-H quinoline), 8.66 (s, 1H, C4-H quinoline), 11.73(s, 1H, OH, D2O exchangeable). MS (m/z): 303.27 (16.5, M+). Analytically calculated for C16H9N5O2: C, 63.37; H, 2.99; N, 23.09. Found. C, 63.65; H, 3.04; N, 22.87.

2-(3-Cyano-4, 6-dimethyl-2-oxopyridin-1(2H)-yl) quinoline-3- carbonitrile (4c): Yield 70%, M.p. 158-160°C. IR (KBr, ν, cm-1): 3102, 2842, 2242, 2198(2CN), 1625. 1H NMR (300 MHz, [D6] DMSO): δ = 2.21, 2.34 (2s, 6H, 2CH3), 6.55 (s, 1H, C5-H pyridine), 7.17-7.20 (t, 1H, C6-H quinoline), 7.41-7.44 (t, 1H, C7- H quinoline), 7.69-7.72 (d, 1H, C5-H quinoline), 7.80-7.82 (d, 1H, C8-H quinoline), 8.33 (s, 1H, C4-H quinoline). MS (m/z): 300.31 (4.11, M+). Analytically calculated for C18H12N4O: C, 71.99; H, 4.03; N, 18.66. Found. C, 71.95; H, 4.24; N, 18.77.

2-(3-Cyano-6-hydroxy-4-methyl-2-oxopyridin-1(2H)-yl) quinoline-3-carbonitrile (4d): Yield 60%, M.p. 213-214°C. IR (KBr, ν, cm-1): 3482 (OH), 3104, 2822, 2212, 2188(2CN), 1633. 1H NMR (300 MHz, [D6] DMSO- D2O): δ = 2.43 (s, 3H, CH3), 6.83 (s, 1H, C5-H pyridine), 7.29-7.32 (t, 1H, C6-H quinoline), 7.50-7.53(t, 1H, C7-H quinoline), 7.64-7.67 (d, 1H, C5-H quinoline), 7.76-7.81 (d, 1H, C8-H quinoline), 8.39 (s, 1H, C4-H quinoline), 12.02(s, 1H, OH D2O exchangeable). MS (m/z): 302.29 (7.09, M+). Analytically calculated for C17H10N4O2: C, 67.55; H, 3.33; N, 18.53. Found. C, 67.48; H, 3.22; N, 18.19.

Synthesis of the amide derivatives 5 and 6: To a solution of 3 (2.36 g, 0.01 mmol) in 1,4-dioxane (25 mL) containing piperidine (1.00 mL) salicylaldehyde (1.22 g, 0.01 mmol) or benzaldehyde (1.06 g, 0.01 mmol) was added. The reaction mixture in each case was heated under reflux for 5 h. The solid products formed upon pouring onto ice-water mixture containing few drops of hydrochloric acid was collected by filtration and crystallized from 1,4-dioxane.

N-(3-cyanoquinolin-2-yl)-2-oxo-2H-chromene-3-il-carboxamide (5): Yield 64%, M.p. 256-257°C. IR (KBr, ν, cm-1): 3355, 3101 2855, 2215, (CN), 1722 1660(2C=O). 1H NMR (300 MHz, [D6] DMSOD 2O): δ = 6.97 (s, 1H, C4-H coumarin), 7.02-7.80 (m, 8H), 8.12 (s, 1H, C4-H quinoline), 8.90 (s, 1H, NH D2O exchangeable). 13C NMR (300 MHz, [D6] DMSO): δ = 44, 95.1, 114.1, 116.8, 118.7, 121.8, 122.5, 124, 125.1, 125.4, 127, 127.2, 128.1, 131.9, 138.5, 147.3, 150.4, 159.3 (O-C=O), 163, 167. MS (m/z): 300.31 (10.6, M+). Analytically calculated for C20H11N3O3: C, 70.38; H, 3.25; N, 12.31. Found. C, 70.14; H, 3.07; N, 12.22.

2-Cyano-N-(3-cyanoquinolin-2-yl)-3-phenylacrylamide (6): Yield 86%, M.p. 122-123°C. IR (KBr, ν, cm-1): 3339(NH), 3078 2849, 2255, 2203 (2CN), 1640(C=O). 1H NMR (300 MHz, [D6] DMSO- D2O): δ= 6.45 (s, 1H, NH D2O exchangeable), 7.00-8.11 (m, 9H), 8.25 (s, 1H, C4-H quinoline), 8.57 (s, 1H, benzylidene CH). MS (m/z): 324.34 (17.1, M+). Analytically calculated for C20H12N4O: C, 70.06; H, 3.73; N, 17.27. Found. C, 70.17; H, 3.99; N, 17.36.

4-Amino-2-hydroxybenzo[b] [1,8] naphthyridine-3-carbonitrile (7): A solution of 3 (2.36 g, 0.01 mmol) in 1, 4-dioxane (20 mL) containing triethylamine (2 mL) was heated under reflux for 5 h. The solid product formed upon pouring onto ice/water was collected by filtration, and crystallized from 1, 4-dioxane.

Yield 63%, M.p. 110-111°C. IR (KBr, ν, cm-1): 3444 (OH, enol form), 3337, 3215 (NH2, NH), 3104, 2838, 2199 (CN), 1622(C=O, keto form). 1H NMR (300 MHz, [D6] DMSO- D2O): δ = 3.71 (s, 2H-NH2 D2O exchangeable), 5.13 (s, 1H, OH, D2O exchangeable), 7.29- 8.66 (m, 5H, quinoline). 13C NMR (300 MHz, [D6] DMSO): δ = 85.2, 116.9, 120.1, 126.8, 128.2, 129.9, 130.1, 136.5, 147.1, 159, 160.2, 166.1(C-OH). MS (m/z): 236.23 (3.9, M+). Analytically calculated for C13H8N4O: C, 66.10; H, 3.41; N, 23.72. Found. C, 66.25; H, 3.27; N, 23.80.

Synthesis of 3-cyanoquinolin-2-yl functionalized pyridone derivatives (8a, b): To a solution of 6 (3.24 g, 0.01 mmol) in 1,4-dioxane (25 mL) and dimethylformamide (5 mL) containing triethylamine (1.00 mL), either malononitrile (0.66 g, 0.01 mmol) or ethyl cyanoacetate (1.13 g, 0.01 mmol) was added. The reaction mixture, in each case, was heated under reflux for 5 hours then cooled and neutralized by pouring onto ice/water mixture containing few drops of hydrochloric acid. The solid products formed, in each case, was filtered off and crystallized from ethanol 95%.

Ethyl 2-amino-5-cyano-1-(3-cyanoquinolin-2-yl)-1,6-dihydro -6-oxo-4-phenyl-pyridine-3-carboxylate (8a): Yield 82%, M.p. 268- 269°C. IR (KBr, ν, cm-1): 3320 (NH2), 3063, 2851, 2216, 2192 (2CN), 1687, 1635 (2C=O). 1H NMR (300 MHz, [D6] DMSO- D2O): δ = 1.16 (t, J = 8.00 Hz, 3H, CH3), 3.81 (s, 2H, NH2 D2O exchangeable), 4.28 (q, J = 8.00 Hz, 2H, CH2), 7.20-7.22 (t, 1H, C6-Hquinoline), 7.45-7.48(t, 1H, C7-H quinoline), 7.60-7.62 (d, 1H, C5-H quinoline), 7.79-7.82 (d, 1H, C8-H quinoline), 8.50 (s, 1H, C4-H quinoline). MS (m/z): 435.43 (14.15, M+). Analytically calculated for C25H17N5O3: C, 68.96; H, 3.94; N, 16.08. Found. C, 68.80; H, 4.01; N, 16.12.

6-Amino-1-(3-cyanoquinolin-2-yl)-2-oxo-4-phenyl-1, 2-dihydropyridine-3, 5-dicarbonitrile (8b): Yield 70%, M.p. 273- 274°C. IR (KBr) cm-1: 3311 (NH2), 3092, 2251, 2222, 2203 (3CN), 1631 (C=O). 1H NMR (300 MHz, [D6] DMSO- D2O): δ = 3.97 (s, 2H, NH2 D2O exchangeable), 7.29-7.31 (t, 1H, C6-H quinoline), 7.41-7.44 (t, 1H, C7-H quinoline), 7.65-7.68 (d, 1H, C5-H quinoline), 7.77-7.80 (d, 1H, C8-H quinoline), 8.62 (s, 1H, C4-H quinoline). MS (m/z): 338.38 (3.7, M+). Analytically calculated for C23H12N6O: C, 71.13; H, 3.11; N, 21.64. Found. C, 71.50; H, 3.05; N, 21.59.

Synthesis of pyrazole carboxamide derivatives (9a, b): To a solution of compound 6 (3.24 g, 0.01 mmol) in 1, 4-dioxane (25 mL) and dimethylformamide (10mL), either hydrazine hydrate 90% (0.50 g, 0.01 mmol), or phenyl hydrazine (1.08 g, 0.01 mmol) was added. The reaction mixture, in each case, was heated under reflux for 3 h. The solid products formed, in each case, upon pouring onto ice/water mixture containing few drops of hydrochloric acid were collected by filtration, and crystallized from 1, 4-dioxane/dimethylformamide mixture (3:2).

3-Amino-N-(3-cyanoquinolin-2-yl)-5-phenyl-1H-pyrazole-4- carboxamide (9a): Yield 70%, M.p. 197-199°C. IR (KBr, ν, cm-1): 3421, 3267 (NH2, 2NH), 3086, 2836, 2206 (CN), 1627 (C=O). 1H NMR (300 MHz, [D6] DMSO- D2O): δ = 3.93 (s, 2H-NH2 D2O exchangeable), 6.89 (s, 1H, NH D2O exchangeable), 7.23-8.52 (m, 10H, quinoline and phenyl), 8.72 (s, 1H, NH exchangeable with D2O). MS (m/z): 354.36 (22.20, M+). Analytically calculated for C20H14N6O: C, 67.79; H, 3.98; N, 23.72. Found. C, 67.71; H, 3.92; N, 23.81.

3-Amino-N-(3-cyanoquinolin-2-yl)-1, 5-diphenyl-1H-pyrazole- 4-carboxamide (9b): Yield 82%, M.p. 137-138°C. IR (KBr, ν, cm-1): 3419, 3250 (NH2, NH), 3099, 2843, 2214 (CN), 1623 (C=O). 1H NMR (300 MHz, [D6] DMSO- D2O): δ = 3.96 (s, 2H-NH2, D2O exchangeable), 7.39 (s, 1H, NH, D2O exchangeable), 7.11- 8.46 (m, 15H, quinoline and 2 phenyl). MS (m/z): 430.46 (15.60, M+). Analytically calculated for C26H18N6O: C, 72.55; H, 4.21; N, 19.52. Found. C, 72.63; H, 4.39; N, 19.80.

2-Cyano-N-(3-cyanoquinolin-2-yl)-2-(2-phenylhydrazono) acetamide (10): To a cold solution (0-5°C) of 3 (2.36 g, 0.01 mmol), in absolute ethanol (20 mL) containing sodium hydroxide (1.00 g) an equimolar amount of cold solution diazotized aniline was gradually added while stirring. The solid product formed upon cooling in an icebath was filtered, washed with water and crystallized from 1, 4-dioxane.

Yield 60%, M.p. 147-148°C. IR (KBr, ν, cm-1): 3359, 3221 (2NH), 3121, 2871, 2253, 2205 (2CN), 1685 (C=O). 1H NMR (300 MHz, [D6] DMSO): δ = 7.34- 8.59 (m, 10H, quinoline and phenyl), 9.18 (s, 1H, NH), 11.02 (s, 1H, NH) MS (m/z): 340.34 (40.11, M+). Analytically calculated for C19H12N6O: C, 67.05; H, 3.55; N, 24.69. Found. C, 67.11; H, 3.40; N, 24.81.

2-(4-Amino-6-oxo-3-phenyl-2-thioxo-2, 3-dihydropyrimidin- 1(6H)-yl) quinoline-3-carbonitrile (11): Equimolar amounts of 3 (2.36 g, 0.01 mmol) and phenyl isothiocyanate (1.35 g, 0.01 mmol) in 1,4-dioxane (20 mL) containing triethylamine (1.0 mL) were heated under reflux for 7. After cooling, the reaction mixture was acidified by hydrochloric acid (few drops) and the crude product was precipitated, collected by filtration and crystallized from 1, 4-dioxane.

Yield 80%, M.p. 256-257°C. IR (KBr, ν, cm-1): 3437, 3232 (NH2), 3072, 2827, 2205 (CN), 1618(C=O). 1H NMR (300 MHz, [D6] DMSOD 2O): δ = 3.97 (s, 2H, NH2, exchangeable with D2O), 6.99 (s, 1H, C5-H pyrimidine), 7.01- 8.53 (m, 10H, quinoline and phenyl). 13C NMR (DMSO-d6) δ: 44.4, 72.9, 95.3, 117.1, 120, 124, 124.9, 125.2, 126.4 (2C), 127.2, 129.2 (2C), 132.1, 134.5, 147.8, 166.2, 166.6 (C-NH2), 167, 177.3. MS (m/z): 371.42 (9.10, M+). Analytically calculated for C20H13N5O S: C, 64.68; H, 3.53; N, 18.86. Found. C, 64.66; H, 3.59; N, 18.90.

Synthesis of 3-cyanoquinolin-2-yl- functionalized thiophene derivative (12) and thiazole derivative (13): Equimolar amounts of 3 (2.36 g, 0.01 mmol) and phenyl isothiocyanate (1.35 g, 0.01 mmol) in dimethylformamide (20 mL) and potassium hydroxide were stirred overnight, then added ethylchloroacetate (1.22 g, 0.01 mmol) or chloroacetone (0.92 g, 0.01 mmol) while stirring were continued for 20 h. The products formed upon pouring onto ice/water mixture containing few drops of hydrochloric acid were collected by filtration and crystallized from ethanol 95% to afford compound 12 and 13 respectively.

Ethyl 3-amino-4-((3-cyanoquinolin-2-yl) carbamoyl)-5-(phenylamino) thiophene-2-carboxylate (12): Yield 80%, M.p. 124-125°C. IR (KBr, ν, cm-1): 3338, 3219 (2NH, NH2), 3058, 2834, 2209 (CN), 1702, 1632(2C=O). 1H NMR (300 MHz, [D6] DMSO- D2O): δ = 1.24 (t, J = 9.00 Hz, 3H, CH3), 4.09 (q, J = 9.00 Hz, 2H, CH2), 4.33 (s, 2H, NH2, exchangeable with D2O), 6.97 (s, 1H, NH, exchangeable with D2O), 7.17- 8.60 (m, 10H, quinoline and phenyl), 9.90 (s, 1H, NH, exchangeable with D2O), MS (m/z): 457.50 (13.12.10, M+). Analytically calculated for C24H19N5O3S: C, 63.01; H, 4.19; N, 15.31. Found. C, 63.22; H, 4.12; N, 15.30.

2-Cyano-N-(3-cyanoquinolin-2-yl)-2-(4-methyl-3-phenyl-3Hthiazol- 2-ylidene) acetamide (13): Yield 80%, M.p. 124-125°C. IR (KBr, ν, cm-1): 3377 (NH), 3061, 2840, 2202, 2160 (2CN), 1641(C = O). 1H NMR (300 MHz, [D6] DMSO): δ = 1.39 (s, 3H, CH3), 6.83 (s, 1H, C5 –H thiazole), 7.29- 8.53 (m, 10H, quinoline and phenyl), 9.70 (s, 1H, NH). MS (m/z): 409.46 (6.50, M+). Analytically calculated for C23H15N5OS: C, 67.47; H, 3.69; N, 17.10. Found. C, 67.55; H, 3.73; N, 17.00.

Synthesis of 3-cyanoquinolin-2-yl- functionalized 3-phenylazo- 2-pyridone derivatives (14a, b): To a solution of 10 (3.40 g, 0.01 mmol) in absolute ethanol (25 mL) and dimethylformamide (5 mL) containing triethylamine (1.00 mL), either of ethyl cyanoacetate (1.13 g, 0.01 mmol) or malononitrile (0.66 g, 0.01 mol) was added. The reaction mixture, in each case, was heated under reflux for 7 h, then cooled and neutralized by pouring onto ice/water mixture containing few drops of hydrochloric acid. The solid products formed, in each case, was filtered off and crystallized from ethanol/dimethylformamide mixture.

Ethyl 2, 4-diamino-1-(3-cyanoquinolin-2-yl)-6-oxo-5-(phenyldiazenyl)-1, 6-dihydropyridine-3-carboxylate (14a): Yield 65%, M.p. 161-162°C. IR (KBr, ν, cm-1): 3359, 3230 (2NH2), 3070, 2852, 2208 (CN), 1722, 1625 (2C = O). 1H NMR (300 MHz, [D6] DMSO- D2O): δ = 1.21 (t, J = 9.30 Hz, 3H, CH3), 3.16, 3.23 (2s, 2H each, 2NH2 D2O exchangeable), 4.10 (q, J = 9.30 Hz, 2H, CH2), 7.23- 8.66 (m, 10H, quinoline and phenyl), MS (m/z): 453.45 (7.3, M+). Analytically calculated for C24H19N7O3: C, 63.57; H, 4.22; N, 21.62. Found. C, 63.45; H, 4.28; N, 21.94.

2-(2, 4-Diamino-3-cyano-6-oxo-5-(phenyldiazenyl)-1, 6-dihydropyridine)- 3-cyanoquinoline (14b): Yield 65%, M.p. 208-209°C. IR (KBr) cm-1: 3358, 3240 (2NH2), 3087, 2834, 2251, 2204(2CN), 1671(C = O). 1H NMR (300 MHz, [D6] DMSO- D2O): δ = 3.19, 3.45 (2s, 2H each, 2NH2, D2O exchangeable), 7.20- 8.46 (m, 10H, quinoline and phenyl), MS (m/z): 406.46 (8.5, M+). Analytically calculated for C22H14N8O: C, 65.02; H, 3.47; N, 27.57. Found. C, 65.11; H, 3.56; N, 27.36.

Antimicrobial Activity

All newly synthesized compounds were test for their in vitro growth inhibitory activity against a standard strain of two gram positive bacteria viz., Bacillus subtilis, Staphylococci aureus and two gram negative bacteria viz., Escherichia coli, Pseudomonas aeruginosa, in addition to fungi (Candida albicans). Antibacterial activity was done by the disk diffusion method. Were the bacteria and fungi sub cultured in BHI medium and incubated for 18h at 37°C, and then the bacterial cells were suspended according to the McFarland protocol in saline solution to produce a suspended of about 10-5CFU ml 1:10 μ of this suspension was mixed with 10 ml of sterile antibiotic agar at 40°C and poured onto an agar plate. Five paper disks (6.0 mm diameter) were fixed onto nutrient agar plate. The solutions of different compounds under test at a concentration of 500 in 5% DMSO were poured in the cup/well of bacteria seeded agar plates. These plates were incubated at 37°C for 24 hours for E. coli and fungi for 4 days at 27°C, whereas plates of other three bacteria were incubated at 27°C for 24 hr. The standard antibiotics used were streptomycin (all at 500 μg/ml) and standard antifungal used were fluconazole at 500 μg/ml, the control solution (only 5% DMSO) did not reveal any inhibition. The zone of inhibition produced by each compound was measured in mm.μg/ml. The results of antimicrobials studies are given in Table 1. The discussion and comparison of antibacterial activity were given with respect to streptomycin antibiotic and antifungal screening was compared with fluconazole.

Compound No Concentration (mg/l) Microorganism (Inhibition zone)
Basillus subtilis Staphylococcus aureus Escherichia coli Pseudomonas aeruginosa Candida albicans
2 500 12 12 11 14 15
3 500 11 13 14 12 6
4a 500 12 10 10 12 12
4b 500 11 12 12 13 14
4c 500 7 13 12 11 12
4d 500 9 14 14 8 12
5 500 13 6 16 10 11
6 500 7 14 13 12 12
7 500 12 11 08 15 9
8a 500 14 13 17 16 14
8b 500 16 14 15 12 16
9a 500 9 15 13 14 13
9b 500 8 9 14 11 10
10 500 12 12 12 8 8
11 500 15 13 16 6 15
12 500 10 8 12 12 8
13 500 9 11 14 13 6
14a 500 16 17 15 14 16
14b 500 15 16 15.5 15 17
Streptomycin 500 25.0 25.7  25.0 25.80 -
Fluconazole 500 - - - - 20.5

Table 1: Antimicrobial activity of synthesized 3-cyanoquinolin-2-yl-functionalized derivatives.

Results and Discussion

The synthetic method adopted to obtain the newly synthesized compound 2 that was prepared by nucleophilic substitution depending on modification of the reported [20] procedure. Where we are going to development of efficient protocols for the preparation of biologically active heterocyclic derivatives along with the versatility of the organic synthon [21]. We herein report the synthesis of 2-aminoquinoline-3- carbonitrile (2) and the strategy depend on an efficient one-pot via in situ generation of tetrazoloquinoline, on contrast to other procedure involving separation then thermal decomposition of formed tetrazole [28] in addition, to other procedure involving harsh conditions [22-26]. We elected to examine the conversion of 1 into 2 with the goals of optimizing reaction conditions under liquid-liquid phase-transfer conditions using chlorobenzene and water as solvent and tetrabutylammonium bromide as catalyst (Figure 1), depending on activated aromatic systems such chloro [27] and a few heteroaromatic systems [27] that can undergo nucleophilic substitution by azide ions. Chloro functionality in 2-position of quinoline-3-carbonitrile [13-16] was found to be labile towards nucleophilic substitution reactions [20,21], so by addition of sodium azide to this chloro functionality in 2-position it forms heterocyclic azide that spontaneously cyclized to give the fused tetrazole form. It well be reported that tetrazole are lipophilic, metabolically stable compounds [28]. In our literature tetrazole can be synthesized directly by a [3+2] dipolar cycloaddition between organoazide and C=N of quinoline ring this reaction occurs through a concerted and regioselective [29,30] [3+2] cycloaddition. It’s well-known that phase transfer catalyst technique shows the novelty of using sodium borohydride [31] as an efficient reducing agent for tetrazoles, to afford pure product in high yields and offers the advantages of permitting a one-pot conversion of 1 into 2 with very simple operative conditions. Thus, in a modified procedure, synthetic strategies based on phase transfer catalyst were adopted and evaluated for the cleavage of tetrazoloquinoline intermediate A (Figure 2) keeping sodium borohydride as a reducing agent [31]. In liquid-liquid phasetransfer conditions, tetrabutylammonium bromide was used as catalyst and chlorobenzene together with water (3:1) was preferred as solvent. Chlorobenzene was used as a solvent to elevate the reaction temperature 20°C higher than bromobenzene [28]. The higher temperature of the reaction mixture facilitates thermal decomposition of tetrazole intermediate that enhanced by using water and it showed unimolecular N2 elimination [32] to produce intermediate B (Figure 3) and this elimination was affected by no tetrazole ring substituent are placed 33. Association of liquid-liquid phase-transfer catalyst with azidolysis by using chlorobenzene and water as solvents proved to be cleaner, rate enhancing and yield improving as compared to direct conversion of chloro to amino functionality under harsh conditions [31-35]. In contrast azidolysis followed by reduction facilitate the indirect amination. Thus azide and tetrazole formation followed by reduction can be viewed a best pathway as latent amino functionalities. The generality of this reaction has been shown by the formation of tetrazole intermediate A (Figure 3) in good yields according to the reported [28] procedure but in this letrature we aimed to formation of tetrazole in situ that exposed to higher temperature condition where it targeted the use of chlorobenzene due to its higher temperature than other solvent as bromobenzene and in this stage the elevated temperature cause decomposition of formed tetrazole then comes the role of water in the reaction where it cause azidolysis of intermediate B (Figure 3) and this accompanied by N2 elmination then comes the role of catalyst where we use quaternary ammonium halide that dissolved in the aqueous phase and it undergoes anion exchange with the anion of the reactant. The ion-pair formed can cross the liquid-liquid interface due to its lipophilic nature and diffuses from the interface into the organic phase, this step being the phase-transfer that lead to formation of intermediate C (Figure 3). and the catalyst subsequently, returns to the aqueous phase and the cycle continues. At this important stage, role of sodium borohydride was come as reducing agent to form the intermediate D (Figure 3) then reduction was continued, and on complete the reaction time to afford the corresponding 2-aminoquinoline-3-carbonitrile (2). Where its IR-spectra of 2 showed the appearance of NH2 Stretching band at 3350 cm-1, which when react with ethylcyano acetate give the key precursor 3 in which IR revealed the presence of C=O at 1655 cm-1. Moreover, the 1H NMR spectrum exhibited singlet at δ 4.28 for the acetamido CH2 and a singlet at δ 6.83 ppm for the amidic NH. By subjecting the compound 3 to reaction with active methylene reagents the respective 2-pyridone derivatives 4a-d were obtained. The appearance of the pyridine C5-H protons at δ 6.83- 6.45 ppm and appearance of exchangeable proton that disappear with D2O or CH3 as in compound 4 c, d will prove the proposed structures. When compound 3 react with salicylaldehyde and benzaldehyde it give compounds 5 and 6 respectively, the structure of the resulting compound 5 was confirmed by appearance of two C=O one belong the amidic at 1660 cm-1 and one at high frequency C=O stretching at 1722 cm-1 cited for the coumarin oxo (not present in imino intermediate), proved by 13C NMR at δ 159.3 in addition to, 1H NMR of C4-H of coumarin at δ 6.97(absent in the start), this also beside the compound 6 in which IR containing two stretching band at 2255 cm-1, 2203 cm-1 (2CN) that prove the structure of compound 6 in addition to, its 1H NMR spectra of 6 showed the presence of one singlet at δ 8.57 ppm due to the presence of benzylidene CH. when compound 3 react with dioxane in presence of triethyl amine it afford compound 7, and the structure of the produced compound were confirmed from its IR and 1H NMR where the presence of OH, and NH2 confirm the structure of compound 7. On the other hand, treatment of the benzylidene derivative 6 with methylene carbonitrile reagents afforded the respective pyridone derivatives 8 a, b The reaction takes place via β -attack on the benzylidene moiety in 6 followed by 1,6-intramolecular dipolar cyclization with concomitant aromatization. The 1H NMR spectra of 8a and 8b showed the presence of one singlet for each at δ 3.81 and δ 3.97 ppm, respectively, due to the presence of the NH2 group. When compound 6 reacted with either hydrazine hydrate or phenyl hydrazine, the corresponding pyrazole systems 9a, b were obtained as the major products. The reaction involves β-attack on the C=C moiety in 6 with subsequent 1, 5-intramolecular dipolar cyclization and concomitant aromatization. Microanalysis and spectral data of 9a, b were fully consistent with the proposed structures. Where the 1H NMR spectra of 9a and 9b showed the presence of one singlet for each at β 3.93 and δ 3.96 ppm, respectively, due to the presence of the NH2 group. On the other hand, compound 3 reacted with benzenediazonium chloride to give the phenylhydrazo derivative 10, the 1H NMR spectrum of compound 10 revealed two singlets at δ 9.18 and 11.02 ppm (exchangeable with D2O) due to (2 NH) groups. The latter compound 10 reacted with either malononitrile or ethyl cyanoacetate to give the 3-phenylazo-pyridone derivatives 14a and 14b, respectively. The proposed structures were based on analytical and spectral data. The IR of compound 14a and 14b showed disappereance of NH stretching band and its 1H NMR spectra of 14a and 14b showed the presence of two singlets for each at δ 3.16, 3.23 ppm, and 3.19, 3.45 ppm respectively, due to the presence of (2 NH2) groups and this data will prove the cyclization and formation of pyridine ring. The studying of the reaction of compound 3 with phenyl isothiocyanate in 1, 4-dioxane containing triethylamine involved a nucleophilic attack by the amidic NH function in 3 on the C=S terminal of the isocyanate reagent to produce the acyclic intermediate. The latter then underwent 1,6-dipolar cyclization to afford compound 11 as the major product, the structure of this compound was proven by the presence of two singlets at δ 6.99 and 3.97 ppm due to pyrimidine C3-H and NH2, respectively. On the other hand, we studying the reactivity of active methylene reagents towards phenyl isothiocyanate in basic dimethylformamide followed by heterocyclization with α-halocarbonyl compounds. These reactions lead to the formation of either thiophene (compound 12) or thiazole (compound 13) systems depending on reaction conditions and the nature of the α-halocarbonyl reagent in which the reaction takes place through the intermediate of the potassium sulphide salt. The disappearance of CH2 singlet observed in the precursor 3, and the appearance of D2O exchangeable NH2 singlet at δ 4.33 ppm for compounds 12 and appearance of one singlet at δ 1.39 ppm for compounds 13 as well as the appearance of singlet at 6.83 ppm assigned to a thiazole C5-H proton in compound 13 (not present in the structure containing thiophen and amino substituent), all this are considered sufficient to confirm the structures of 12 and 13.

organic-chemistry-current-research-General-synthetic-route

Figure 1: General synthetic route to new derivatives 4-9.

organic-chemistry-current-research-General-synthetic-route-new-derivatives

Figure 2: General synthetic route to new derivatives 10-14.

organic-chemistry-current-research-Proposed-mechanism

Figure 3: Proposed mechanism and possible intermediates.

Conclusion

We have synthesized polyfunctionalized heterocyclic systems based on 2-cyano-N-(3-cyanoquinolin-2-yl) acetamide (3) using convenient method. The antimicrobial activity of all synthesized compounds showed moderate of antimicrobial activity, From the screening data it was found some derivative (8a, b), 11 and 14 a, b that containing pyridine ring have encouraging antifungal activity, which need to be further investigation to get better antifungal and antibacterial agents in the future. Microbiological testing of the newel synthesized compounds was performing in the Regional Center for Mycology and Biotechnology, Department of Microbiology, Faculty of Science, Al- Azher University, Cairo, Egypt.

Acknowledgments

The authors would like to express their sincere thanks to all members in the Regional Center for Mycology and Biotechnology, Department of Microbiology, Faculty of Science, Al-Azher University, Cairo, Egypt, for performing the antimicrobial testing.

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Citation: El-Gamal KM (2016) Synthesis and Antimicrobial Evaluation of Polyfunctionally Heterocyclic Compounds Bearing Quinoline Moiety. Organic Chem Curr Res 5: 168.

Copyright: © 2016 El-Gamal KM. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
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