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Microbial Production of Short Chain Alkanes: A Future Biofuel
Advancements in Genetic Engineering

Advancements in Genetic Engineering
Open Access

ISSN: 2169-0111

+44 1478 350008

Mini Review - (2015) Volume 4, Issue 3

Microbial Production of Short Chain Alkanes: A Future Biofuel

Silva LMS*
University of Colombo, Colombo 03, Western Province, Sri Lanka
*Corresponding Author: Silva LMS, University of Colombo, Colombo 03, Western Province, Sri Lanka Email:

Abstract

For many decades we have been depending on fossil resources to produce liquid fuels such as gasoline, diesel, kerosene, etc. It is estimated that oil reserves mined at current rates will last only about 40 years before running dry. Increasing concerns about the global petroleum supply, environmental issues including global warming and climate change have focused attention on the need to develop alternative methods to produce fuels.

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Short Review

For many decades we have been depending on fossil resources to produce liquid fuels such as gasoline, diesel, kerosene, etc. It is estimated that oil reserves mined at current rates will last only about 40 years before running dry. Increasing concerns about the global petroleum supply, environmental issues including global warming and climate change have focused attention on the need to develop alternative methods to produce fuels. Therefore, it is of paramount importance that the scientific community comes up with novel ways to obtain fuels and chemicals that are both sustainable and eco-friendly. Production of short-chain alkanes required for gasoline using Escherichia coli bacterium satisfies both sustainability and eco-friendliness crirerias [1].

Gasoline is a petroleum-derived product. Mainly it is used as a fuel for transportation. It is a mixture of hydrocarbons, blending agents and additives. The hydrocarbons, called alkanes, consist only of carbon and hydrogen atoms. Gasoline has a combination of straight-chain and branched-chain alkanes (hydrocarbons) consisted of 4-12 carbon atoms linked by direct carbon-carbon bonds.

Previously, there has been success in the past at metabolically engineering Escherichia coli to produce 13-17 atom long-chain hydrocarbons, which is suitable for replace diesel [2]. However, the first report on the microbial production of short-chain alkanes was released by a team at the Korea Advanced Institute of Science and Technology (KAIST). They have developed a novel strategy for microbial gasoline production through the metabolic engineering of Escherichia coli. The team engineered platform Escherichia coli strains that are capable of producing short-chain alkanes via the fatty acyl-ACP to free fatty acid to fatty acyl-CoA pathway [1].

In the beginning, in order to maximize the production of short-chain alkanes in vivo, the production of free fatty acids needed to be maximized. Therefore genetic modifications have been made to E. coli genome to increase the formation of short-chain fatty acids suitable for subsequent conversion to short-chain alkanes. The fadD gene of E. coli was deleted to prevent conversion of free fatty acids (both short-chain and long-chain) to fatty acyl-CoA. And fadE gene was deleted from the E. coli to prevent the beta-oxidation that degrades the fatty acyl-CoA generated in vivo. The FabH enzyme promotes the initiation of fatty acid biosynthesis. But the unsaturated fatty acyl-ACPs inhibit the activity of FabH enzyme. Therefore the fadR gene was deleted to prevent the up regulation of the fabA and fabB genes responsible for unsaturated fatty acid biosynthesis [3], which in turn enhances the initiation of fatty acid biosynthesis. After the deletion of genes, expression vectors have been introduced into the E. coli bacteria in order to produce short chain alkanes from those free fatty acids. Four enzyme activities are introduced into the E. coli using two expression vectors called pTrcAcR’TesA which contains tesA and acr genes that are responsible for producing modified thioesterase and fatty acyl-CoA reductase respectively and pTacCer1fadD which contain CER1 and fadD genes that are responsible for producing fatty aldehyde decarbonylase and fatty acyl-CoA respectively.

Once a glucose molecule enters into the genetically modified E. coli it undergoes glycolysis and forms pyruvic acid. Then it gets converted into acetyl-CoA under the presence of pyruvate dehydrogenase enzyme [4]. The acetyl-CoA is converted into fatty acyl-ACP in the presence of Acetyl CoA:ACP transacylase. In this strategy, acetyl-CoA is used directly for fatty acid chain elongation, allowing for improved carbon and energy efficiency compared to the fatty acid biosynthesis pathway which requires activation of acetyl-CoA to malonyl-CoA. To produce biofuels with an even-numbered carbon chain, the fatty acyl-ACP is cleaved by a modified thioesterase [5] releasing the corresponding free fatty acid. The thioesterase is yet another key target for metabolic engineering. Free fatty acids get converted into fatty acyl-CoA under the presence of fatty acyl-CoA synthetase which is derived from fadD gene. Fatty acyl-CoAs were reduced to fatty aldehydes and then to short-chain alkanes which are required to produce gasoline using fatty acyl-CoA reductase and fatty aldehyde decarbonylase respectively.

Free fatty acids are converted into their corresponding short chain alkanes (petrol) by introducing a new synthetic route and optimizing culture conditions. The final engineered strain produced upto 580.8 mg/l of short chain alkanes consisting of nonane (327.8 mg/l), dodecane (136.5 mg/l), tridecane (64.8 mg/l), 2-methyl-dodecane (42.8 mg/l) and tetradecane (8.9 mg/l), together with small amounts of other hydrocarbons [1].

Pumping out petrol with bioengineered microbes is an excellent new starter platform for the sustainable production of biofuels.

References

  1. Choi YJ, Lee SY (2013) Microbial production of short-chain alkanes. Nature 502, 571-574.
  2. Schirmer  A, Rude MA, Li X, Popova E, Del Cardayre SB (2010) Microbial biosynthesis of alkanes. Science 329: 559-562.
  3. Nunn WD, Giffin K, Clark D, Cronan JE (1983) Role for fadR in unsaturated fatty acid biosynthesis in Escherichia coli. J. Bacteriol 154: 554–560.
  4. Magnuson K, Jackowski S, Rock CO, Cronan JE (1993) Regulation of fatty acid biosynthesis in Escherichia coli. Microbiol Rev 57:522–542.
  5. Lo YC, Lin SC, Shaw JF, Liaw YC (2005) Substrate specificities of Escherichia coli thioesterase I/protease I/lysophospholipase L1 are governed by its switch loop movement.  Biochemistry 44: 1971–1979.
Citation: Silva LMS (2015) Microbial Production of Short Chain Alkanes: A Future Biofuel. Adv Genet Eng 4:136.

Copyright: © 2015 Silva LMS. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
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