International Journal of Biomedical Data Mining
Open Access

Abstract

Comparison of Genomes of Pseudomonas aeruginosa Strains by using Chaos Game Representation

Magdalena Nowak, Wiesław Kaca and Grzegorz Czerwonka

Chaos Game Representation method was used to compare full genomes of the several laboratory and clinical strains of Pseudomonas aeruginosa. The sensitivity of method was tested and results indicate that it can be helpful for clustering DNA base pair sequences and clonal differentiation of pathogenic Gram-negative bacterial strains.