Biological Systems: Open Access

ISSN - 2329-6577

44-7723-59-8358

There and back again: Two views on the protein folding puzzle

4th International Conference on Integrative Biology

July 18-20, 2016 Berlin, Germany

Alexei V Finkelstein

Russian Academy of Sciences, Russia

Scientific Tracks Abstracts: Biol syst Open Access

Abstract :

The intricate protein 3D structure results from spontaneous folding (both in vitro and in vivo), though more than the life-span of the Universe would have been required to find it by sampling of amino acid conformations, this is called "the Levinthal's paradox". To resolve it, various models of folding were proposed during decades. However, they fail to overcome this paradox when the 3D structure�??s stability is close to that of the unfolded chain, as it is in reality. The folding rate problem was first solved using unfolding (not folding!). The trick is that, firstly, the rates of the forward and reverse reactions coincide when the structure stability equals to that of the unfolded chain (according to the �??principle of detailed balance�?� well-known in physics) and it is much easier to imagine and investigate how the thread unfolds than how it obtains a certain fold. Recently, the folding problem has been also solved �??from the viewpoint of the folding chain�?�: it has been proved that the necessary, search for the most stable fold, sampling is by many orders of magnitude smaller when considered at the level of formation and packing of secondary structures than at the Levintalconsidered level of amino acid conformations. The estimated rate of such a sampling turned out to be physically and biologically reasonable for proteins of various sizes.

Biography :

Alexei V Finkelstein was graduated in 1970 and received his PhD degree in 1976 from the Moscow Institute of Physics and Technology. He is the Head of the Protein Physics Lab at the Institute of Protein Research, Russian Academy of Sciences and is a Professor of the Lomonosov Moscow University awarded by the State Prize of Russia; elected to the Russian Academy of Sciences, Alumnus of LMB MRC (Cambridge) and HHMI Scholar (1995-2010). He has published 200+ papers in reputed journals. His two books on protein physics has been published in English, Russian and Chinese. He is serving as an Editorial Board Member of several reputed journals.

Email: afinkel@vega.protres.ru

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