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Short Commentary on: Absence of Genetic Variation in the Coding Sequence of Myostatin Gene (MSTN) in New Zealand Cattle Breeds
Journal of Data Mining in Genomics & Proteomics

Journal of Data Mining in Genomics & Proteomics
Open Access

ISSN: 2153-0602

Commentary - (2020) Volume 11, Issue 1

Short Commentary on: Absence of Genetic Variation in the Coding Sequence of Myostatin Gene (MSTN) in New Zealand Cattle Breeds

Ishaku L Haruna, Huitong Zhou and Jon GH Hickford*
 
*Correspondence: Jon GH Hickford, Faculty of Agriculture and Life Sciences, Lincoln University, Lincoln 7647, New Zealand, Tel: +64-3-423-0665, Email:

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About the Study

The myostatin gene MSTN, sometimes called the Growth and Differentiation Factor 8 (GDF8) gene encodes the myostatin protein MSTN. The protein is a circulating factor secreted by muscle cells whose function is to regulate the pre-natal proliferation of muscle fibres [1,2]. At least 20 different genetic variants (deletions, insertions and nucleotide substitutions) have been described for cattle MSTN [3].

In their recent investigation of genetic variation and haplotypic diversity in MSTN of 10 New Zealand (NZ) cattle breeds (Charolais, Hereford, Angus, South Devon, Simmental, Red Poll, Composite, Murray Grey, Shorthorn and cross bred Holstein-Friesian × Jersey-cross cows), Haruna et al. [4] did not identify any genetic variation in the coding sequence of MSTN in any of the NZ breeds investigated. This was in contrast to previous reports about European cattle breeds, and since the NZ breeds investigated originated from Europe, Haruna et al. [4] suggested this may be attributed to test sample size, founder effects, selection, and other cross-breeding and in-breeding practices. The focus of this commentary is to elaborate more on some of these factors, as we compare the NZ results with their European parent breeds.

In an investigation of haplotypic diversity in MSTN of European cattle breeds, Dunner et al. [5] identified five nucleotide variations in the coding region of bovine MSTN in nine European cattle breeds (Charolais, Maine-Anjou, Aubrac, Salers, Parthenaise, Bazadaise, Ayrshire, Galloway cattle and the Intr95 sire-line). Two of these nucleotide variations brought about amino acid change (p.S105C and p.D182N), whereas three (c. 267A/G, c.324C/T and c.387G/A) were silent. The c.324C/T was identified in exon 1 in the Charolais, Maine-Anjou, Aubrac, Salers and Intr95 sire-line cattle breeds. Haruna et al. [4] also investigated the Charolais breed, but found no variation in the exons. This could have been for a number of reasons as outlined above. Reports from the NZ Charolais cattle society [5,6] reveal that between 1969 and 1981, 61 bulls and 302 Charolais cows were imported into NZ from Great Britain and bred, which included bulls mated to Angus, Friesian and Hereford cows over five successive generations. In this way, the ‘NZ Charolais’ was developed, with it still having the typical Charolais growth rate and muscle development, but being better suited to the pasturebased beef production systems used in NZ. Thus, selection pressure and cross breeding strategy may have contributed to the differences between the NZ Charolais and the European Charolais cattle investigated by Dunner et al.[5].

Introgression from other populations may result in the loss of original genetic variants, hence, breeds can not only be threatened by extinction due to breed replacement, but also by the genetic erosion of native populations [7]. In this context, although the NZ Charolais might have originated from Europe, the longer the time that populations have remained isolated, the greater will be the genetic differentiation due to random genetic drift, particularly if the effective population size has been small.

In an investigation of genetic differences between Hereford cattle from Britain, NZ, Canada, Ireland and Sweden, Blott et al. [7], suggested that founder effects and genetic drift may have played a significant part in the differentiation of national populations. Also, while varied selection objectives may have promoted genetic divergence of the different population, intense selection within a population may have further reduced levels of genetic variation in some populations. Studies on the effect of introgression of Holstein genes into European populations of black-and-white cattle have found that while the performance of production traits (milk yield and protein) was improved, there was an unfavourable effect on fertility traits [8-10].

Even though the NZ and European cattle breeds are likely to have originated from a common ancestor, as suggested by Edwards et al. [9], a number of different effects such as selection objectives, cross-breeding and inbreeding, genetic drift and founder effects may have contributed to the physical and physiological differences within this species, which are reflected in their coding sequences. This is supported by the observation that variation within coding and non-coding sequences produces phenotypic variation between both individuals in a species, and between different species.

References

Author Info

Ishaku L Haruna, Huitong Zhou and Jon GH Hickford*
 
Faculty of Agriculture and Life Sciences, Lincoln University, Lincoln 7647, New Zealand
 

Citation: Haruna IL, Zhou H, Hickford JGH (2020) Short Commentary on: Absence of Genetic Variation in the Coding Sequence of Myostatin Gene (MSTN) in New Zealand Cattle Breeds. J Data Mining Genomics Proteomics. 11:222. DOI:10.35248/2153-0602.20.11.222

Received Date: May 07, 2020 / Accepted Date: Jun 22, 2020 / Published Date: Jun 29, 2020

Copyright: © 2020 Haruna IL, et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

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